Amino structure

I am feeling fundamentally lazy when writing this. In case you forgot, all amino acids have this formula:

NH₂RHOO

Such that R is the functional group that decides basically the fundamental properties of each molecule
There is a lot of groups and other bullshit you can study about these but its probably easier to learn the fundamental structures of each amino acid because you can just re-derive the properties from first principles at that point

Simple / Hydrocarbons

The most fundamental amino acid is #Glycine, which has an R group of hydrogen, giving it a structure of:

NH₂HHOO

The next most simple are ones that just have hydrocarbon chains, giving them hydrophobic properties, w/ variable shapes and masses

#Alanine: Methyl group addition

NH₂CH₃HOO

#Valine: Isopropyl addition

NH₂H₃CCH₃HOO

This is quickly becoming difficult to visualize but that's what the anki cards are for
Just found a cool plugin to let me render this easily, if it looks like gibberish and/or basic SMILES code to you you need to install obsidian-chem
#Leucine: iso-butyl addition

H₂NCH₃H₃COHO

#Isoleucine:Think an isomer of leucine, 2-butyl addition

H₂NCH₃CH₃OHO

Weird cousins of the hydrocarbons

It gets a little weirder from here but not at all unintuitive
#Methionine: Thioether group addition idk

NH₂SCH₃HOO

Think meth-thio-nine. I.e. there's a sulfur and a methyl on the R terminal end
#Proline: This one can only be described as absolutely bizarre.

N⁺HOO

The hydrocarbon bonds back to the amino nitrogen which causes steric strain, which makes this a common structural amino acid in areas of the protein where it bends. Yes I promise this is still an amino acid.

Aromatic😤

#Phenylalanine:Like phenol + alanine dehydration synthesis. Its a benzene ring on an amino acid. Don't let the name confuse you, it does not have an OH group.

NH₂HOO

#Tyrosine: Phenylalanine's polar cousin. There is an OH in the para position of the benzene, which adds a little bit of shared electronegativity to the ring. Apparently this makes it very useful in cell signaling, and it's a vital part of the tyrosine kinase receptor signaling mechanism

NH₂OHHOO

#Tryptophan: Biggest and most complex amino acid. Has a role in protein-protein interactions I guess

NH₂NHHOO

Polar friends :3

Next two are dead simple, just add an OH group
#Serine

NH₂OHHOO
NH₂H₃COHHOO

#Cysteine: Adds a thiol (SH), helps form disulfide bonds IYKYK

NH₂SHHOO

These next ones require some explanation. At physiologic pH, the amino groups on the R group of these molecules are uncharged. Their variants, which will be discussed next, are acidic and become negatively charged
#Asparagine:

H₂NOH₂NOHO
NH₂OH₂NHOO

Charged aminos

Negatively charged/Acids:

These are the two acidic variants of the previous ones. The amine + ketone are replaced with a carboxylic acid
#Aspartic-acid:

H₂NOO⁻OHO
NH₂OO⁻HOO

Negatively Charged/Alkaline:

#Lysine: Primary amino takes accepts electrons/binds to negative charges

H₂NN⁺OHO

#Arginine:Contains a guanidinium group, which is highly basic

NH₂NHNH₂H₂N⁺HOO

Side note, the guanidine structure (NH2)2C=(NH2+), at the end is the same guanidine in, #Guanine, the nucleotide.

#Histidine: Has a structure containing an imidazole ring, similar to histamine. Plays a role in enzyme active sites.

NH₂NHNHOO